Green trajectory line and ship dmg is back?

[Sgtmonkeynads]

I just got everything working again? But now I notice that I can not save any gameplay options. The green laser of doom is stuck on and the ship damage indicator as well.

I check them to be off, apply setting, start game, boom still there. Go back, check and they aren't checked anymore.

How do you permanently disable them?
What is the file location to manually do it?
Thanks in advance.