Mabey you should start over with a fresh install of the game if need be. Once installed and patched, install the JSGME into the main SH4 folder. If you navigate to your SH4 folder, you should now see an icon that looks like a gear. This is the JSGME. Click on the icon to enable the JSGME. A MODS folder should now be created. This is the folder that you will unzip your mods to.
When you have a mod you want to install, simply unzip the files into the MODS folder in the SH4 directory. Click on the gear icon again, and you should now see the available mod ready for enableing. If you install multiple mods, and recieve a conflict warning, you need to make a choice because I think the newer mod will overwrite any previous mod that it may conflict with. I hope this helps you out alittle, and I'm sorry if it's all been said befor. Good luck! If you're still having probs, don't be afraid to ask for help.
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