No problem
Ideally, you can talk to an admiral who's standing on the dock near the stern of your sub. You can select an option to receive new orders, and then select another option to begin the new patrol, at which point you automatically get zoomed to your bridge.
Haven't asked yet, but are you running the game unmodded? Unmodded SH5 is a festival of confusing bugs.
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.Godspeed.
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