Reinstalled, ran through everything again, and yeah; it's an above/below thermal indicator.
Don't know why I was getting it on missions where there was no thermal, but it's not happening now.
Also getting appropriate changes in SNS and COMP readings when tracking a contact while crossing the layer. Seems like the opposite of what should have indicated was happening last time, it wasn't making any sense. Or maybe I was just mistaken - that's probably more likely...
Anyway, issue resolved. Thanks for the replies, and sorry for the trouble.
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