Well dude,
I had the same problem. I thought to solve it by completely deleting sh3 and reinstalling (inclusive of deletion of all careerdata).
After all this work I installed the 1.4 patch and gwx and the old mods folder and jsgme installer WITHOUT activating it.
Then I tried gwx1.02.....gwx 1.02 still refused to install saying again something like not all mods being deactivated....
Desperate, I temporarily trew out the mods folder and jsgme and tried again.
It then actually worked!
So in hindsight, I could have probably have saved me the trouble of reinstalling!
Anyways, I suggest for you to temporarily throw out anything mod related like jsgme and mod folder, and THEN try the patch.
Hope this helps,
cheers trebby.
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Flying Dutchman
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