Why not simply use the Save mod profile and Load mod profile functions of JSGME? Then you don't have to reload all your mods individually if you want to make a change that isn't at the top of the list. And the file JSGME Mod Profile.mep gives you a nice printable (and editable!) list of you active mods. Or you can use the Export activated mod list function, which will make you a text file or print the list? JSGME has a bunch of useful features under the Tools menu.
BTW, making changes to your activated mod list without rolling back SH3 Commander is an invitation to disaster. You can corrupt the mods you have installed and even the base SH3 (or GWX) files. And the only way to recover is sometimes a complete reinstall. This is a very dangerous mistake to make! (Don't ask me how I know....)
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