your JSGME is in the wrong location.
jsgme.exe should be in your root folder, with sh5.exe
MODS folder should be on the same level as data folder in the SH5.
From what you have shown, it seems that you have an extra folder, called JSGME, which contains the MODS folder. As a result no mods are actually activated on the SH5 game, they are just copied to data folder INSIDE the JSGME folder.
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