They do work. The problem is the other mods you have. Do you use a mod manager like JSGME? If not, you should. Right now I'm using AOTD 2.0 with JSGME and it works fine. Unfortunately, I think...you are going to have to uninstall/reinstall SHIII, then install the 1.4b patch. Then use JSGME mod manager for all your mods. Just a suggestion.
Mast