Well, i don't know what the problem was but it seems to have gone now....I tried a patrol without the no jawohl mod and it worked ok...Just to make sure it was that, i reloaded the mod and tried another patrol..It worked just fine!
The timing of the problem seemed to match with loading the no jawohl mod but yeh, i guess it was just bad timing and i'm putting it down to a random bug...
Thanks to everyone that chipped in with their thoughts....Good hunting
