[Rubini]

After reinstall my mods (not the game) i haven´t not more this problem. Even the deep under keel problem is gone.
My thoughts:
1. Sh5 is really sensible in the UI/teleportation
2. The deep under keel solution is this: when reload or start a mission don´t ask deep under keel too early, wait a minute in game (probably some automation routine needs to finish) and then you will have not problems.
3. The problem of the crew not returning to the deck is about mod mess (draught modifications like TDW suggested?) and perhaps also some teleportation call that don´t like so much key hits.
4. but, the best news is that this isn´t a real problem, you will learn how to avoid them.