There is a particle density slider in the options screen that helped me when I had temperature issues. But it's better to fix the issue where it originates. Airflow into and out of the case, cleaning fans on CPU and not to forget GPU (graphical processing unit), thin layer of thermal paste between the chips and heatsink. When it is still not enough I'd leave the case open.
Whoops, I didn't realise that your pc isn't a regular case. The above may not be fixable for you. Which model exactly do you have? There are several Eeetops. It looks like they are not really intended for intensive 3d application like games such as SH3.
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