Use PaintShop Pro, Photoshop, GIMP, or InfranView... The last two are freeware. I use GIMP, btw.
I haven't done it myself, but I suppose you would just crop out the SH3 logos from the original screens and apply them to your new screens, on a seperate layer. Then you can edit and resize as you see fit.
Make sure to save your files in such a format that will accept layers (for example, .psd or .psp). Then export to a .tga when you want to try it in-game, while making sure not to delete your psd's or psp's. Then you can always go back and edit.
Just a few basic steps... Have fun!
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