Did you run over any power ups, or eat the special soup?
Snippiness aside, that does sound interesting. I wonder if there's some behaviour in the engine that is causing variable damage according to campaign circumstances. Are you positive there isn't anything in the mods you've downloaded that is modifying torpedo values?
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"My advice - buy the damn game and play the arse off it. It's not all there yet but it's still a damn good game, and we all know it'll be even better once the community is done crawling all over it." User 'Sideways' 08th March 2010.
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