Made more harbor attacks in my current campaign (using the GFO mod btw with RSRD and some other mods) and so far the ships have been properly located in the harbor. My rate of success there has improved a lot now but still is not better than against mobile targets. Sometimes the harbor ships simply refuse to sink and many torpedoes are duds (it's 1942 in my campaign, so this is realistic).
Thanks for all the tips.
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